STRINGSTRING
Bra002261 protein (Brassica rapa) - STRING interaction network
"Bra002261" - AT5G19770 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002261AT5G19770 (E=6e-236) TUA3 | TUA3; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)    
Predicted Functional Partners:
Bra009710
AT5G23860 (E=1e-247) TUB8 | TUB8; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.996
Bra018379
AT2G29550 (E=7e-242) TUB7 | TUB7; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.996
Bra018184
AT5G62690 (E=5e-248) TUB2 | TUB2; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.996
Bra008903
AT5G12250 (E=2e-248) TUB6 | TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (448 aa)
     
0.996
Bra039987
AT2G29550 (E=2e-240) TUB7 | TUB7; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.996
Bra027544
AT5G44340 (E=5e-246) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
0.989
Bra015815
AT1G75780 (E=1e-247) TUB1 | TUB1; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
0.989
Bra010114
AT5G62690 (E=1e-248) TUB2 | TUB2; GTP binding / GTPase/ structural molecule ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
     
0.987
Bra010114.1-P
AT5G62690 (E=1e-248) TUB2 | TUB2; GTP binding / GTPase/ structural molecule (450 aa)
     
0.987
Bra003116
AT5G44340 (E=6e-072) TUB4 | TUB4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (233 aa)
     
0.985
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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