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Bra002352 protein (Brassica rapa) - STRING interaction network
"Bra002352" - AT5G21060 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002352AT5G21060 (E=4e-162) | homoserine dehydrogenase family protein (378 aa)    
Predicted Functional Partners:
Bra010315
AT4G29840 (E=1e-271) MTO2, TS | MTO2 (METHIONINE OVER-ACCUMULATOR 2); threonine synthase (525 aa)
   
  0.990
Bra036724
AT4G29840 (E=2e-255) MTO2, TS | MTO2 (METHIONINE OVER-ACCUMULATOR 2); threonine synthase (524 aa)
   
  0.989
Bra011140
AT4G29840 (E=8e-282) MTO2, TS | MTO2 (METHIONINE OVER-ACCUMULATOR 2); threonine synthase (524 aa)
   
  0.989
Bra008051
AT1G72810 (E=3e-270) | threonine synthase, putative (518 aa)
   
  0.989
Bra002047
AT2G17265 (E=1e-166) HSK | HSK (HOMOSERINE KINASE); homoserine kinase (370 aa)
 
  0.985
Bra037278
AT2G17265 (E=4e-160) HSK | HSK (HOMOSERINE KINASE); homoserine kinase (370 aa)
 
  0.985
Bra009655
AT2G17265 (E=7e-171) HSK | HSK (HOMOSERINE KINASE); homoserine kinase (373 aa)
 
  0.985
Bra006235
AT5G14060 (E=1e-273) CARAB-AK-LYS | CARAB-AK-LYS; amino acid binding / aspartate kinase (537 aa)
  0.978
Bra008840
AT5G13280 (E=2e-258) AK-LYS1, AK1, AK | AK-LYS1 (ASPARTATE KINASE 1); aspartate kinase (551 aa)
  0.978
Bra023401
AT5G13280 (E=2e-205) AK-LYS1, AK1, AK | AK-LYS1 (ASPARTATE KINASE 1); aspartate kinase (554 aa)
  0.977
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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