STRINGSTRING
Bra002370 protein (Brassica rapa) - STRING interaction network
"Bra002370" - AT5G21430 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002370AT5G21430 (E=4e-082) | DNAJ heat shock N-terminal domain-containing protein (217 aa)    
Predicted Functional Partners:
Bra038381
AT4G09350 (E=9e-104) | DNAJ heat shock N-terminal domain-containing protein (243 aa)
     
   
  0.516
Bra035989
AT5G43750 (E=2e-093) | unknown protein (222 aa)
     
   
  0.513
Bra033642
AT1G64770 (E=8e-155) NDF2 | NDF2 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); carbohydrate binding / catalytic (352 aa)
     
   
  0.453
Bra006777
AT5G58260 (E=3e-103) | Encodes subunit NDH-N of NAD(P)H-plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. (208 aa)
     
   
  0.441
Bra016189
AT1G70760 (E=5e-088) CRR23 | CRR23 ((chlororespiratory reduction 23) (195 aa)
     
   
  0.432
Bra007941
AT1G70760 (E=2e-090) CRR23 | CRR23 ((chlororespiratory reduction 23) (192 aa)
     
   
  0.432
Bra019259
AT4G23890 (E=4e-114) | unknown protein (243 aa)
     
   
  0.426
Bra011839
AT4G39710 (E=5e-047) | immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative (200 aa)
     
   
  0.416
Bra013741
AT4G23890 (E=1e-107) | unknown protein (242 aa)
     
   
  0.409
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (14%) [HD]