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Bra002386 protein (Brassica rapa) - STRING interaction network
"Bra002386" - AT3G44110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002386AT3G44110 (E=7e-202) ATJ3, ATJ | ATJ3; protein binding (422 aa)    
Predicted Functional Partners:
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
 
  0.990
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
 
  0.990
Bra004709
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding (657 aa)
   
  0.970
Bra005610
AT2G32120 (E=7e-258) HSP70T-2 | HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2); ATP binding (564 aa)
 
  0.950
Bra013046
AT5G02500 (E=6e-225) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (546 aa)
 
  0.948
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
   
0.948
Bra024699
AT5G02500 (E=8e-263) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (584 aa)
 
  0.946
Bra035470
AT5G02500 (E=6e-191) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (596 aa)
 
  0.946
Bra016644
AT1G16030 (E=0.0) Hsp70b | Hsp70b (heat shock protein 70B); ATP binding (650 aa)
 
  0.946
Bra013786
AT4G24280 (E=0.0) cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding (711 aa)
 
  0.946
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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