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Bra002453 protein (Brassica rapa) - STRING interaction network
"Bra002453" - AT5G60770 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002453AT5G60770 (E=3e-286) ATNRT2.4, NRT2.4 | ATNRT2.4; nitrate transmembrane transporter (527 aa)    
Predicted Functional Partners:
Bra008333
AT1G77760 (E=0.0) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (906 aa)
     
 
  0.977
Bra015656
AT1G77760 (E=1e-253) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase (890 aa)
     
 
  0.975
Bra003670
AT1G77760 (E=0.0) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (910 aa)
     
 
  0.975
Bra015227
AT2G15620 (E=8e-313) NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming) (589 aa)
   
 
  0.969
Bra039844
AT2G15620 (E=3e-286) NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming) (507 aa)
   
 
  0.847
Bra035735
AT2G15620 (E=3e-015) NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming) (106 aa)
   
 
  0.847
Bra034128
AT5G04590 (E=0.0) SIR | SIR; sulfite reductase (ferredoxin)/ sulfite reductase (638 aa)
   
 
  0.847
Bra009441
AT5G04590 (E=0.0) SIR | SIR; sulfite reductase (ferredoxin)/ sulfite reductase (647 aa)
   
 
  0.847
Bra001368
AT5G04590 (E=0.0) SIR | SIR; sulfite reductase (ferredoxin)/ sulfite reductase (643 aa)
   
 
  0.847
Bra026136
AT3G01910 (E=8e-210) SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE); sulfite oxidase (389 aa)
     
 
  0.754
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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