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Bra002468 protein (Brassica rapa) - STRING interaction network
"Bra002468" - AT5G60600 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra002468AT5G60600 (E=0.0) GCPE, ISPG, CSB3, CLB4, HDS | HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE); 4 iron, 4 sulfur cluster binding / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (694 aa)    
Predicted Functional Partners:
Bra011522
AT4G34350 (E=2e-246) CLB6, ISPH, HDR | HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (462 aa)
 
  0.994
Bra034620
AT4G34350 (E=7e-251) CLB6, ISPH, HDR | HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (572 aa)
 
  0.993
Bra027770
AT1G63970 (E=6e-096) ISPF, MECPS | ISPF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (233 aa)
 
 
  0.981
Bra027672
AT1G63970 (E=3e-097) ISPF, MECPS | ISPF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (233 aa)
 
 
  0.981
Bra035881
AT5G62790 (E=2e-245) DXR, PDE129 | DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase (475 aa)
 
   
  0.948
Bra010123
AT5G62790 (E=1e-254) DXR, PDE129 | DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase (481 aa)
 
   
  0.944
Bra026591
AT2G02500 (E=8e-128) ISPD, ATMEPCT, MCT | ISPD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (275 aa)
 
   
  0.849
Bra033495
AT4G15560 (E=0.0) CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase (708 aa)
 
   
  0.808
Bra012040
AT2G26930 (E=3e-067) ATCDPMEK, PDE277, ISPE | ATCDPMEK (4-(CYTIDINE 5’-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE); 4-(cytidine 5’-diphospho)-2-C-methyl-D-erythritol kinase (326 aa)
   
   
  0.802
Bra012779
AT4G15560 (E=8e-232) CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase (684 aa)
 
   
  0.745
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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