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Bra002510 protein (Brassica rapa) - STRING interaction network
"Bra002510" - AT5G60120 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002510AT5G60120 (E=5e-161) TOE2 | TOE2; DNA binding / transcription factor (452 aa)    
Predicted Functional Partners:
Bra008739
AT5G14760 (E=0.0) AO | AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (649 aa)
       
      0.906
Bra023541
AT5G15850 (E=6e-052) COL1, ATCOL1 | COL1 (constans-like 1); transcription factor/ zinc ion binding (315 aa)
       
 
  0.622
Bra008668
AT5G15850 (E=7e-106) COL1, ATCOL1 | COL1 (constans-like 1); transcription factor/ zinc ion binding (337 aa)
       
 
  0.622
Bra020425
AT5G57660 (E=7e-151) ATCOL5, COL5 | zinc finger (B-box type) family protein (342 aa)
       
      0.622
Bra021281
AT3G17860 (E=3e-154) JAZ3, JAI3, TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3) (353 aa)
       
      0.615
Bra031065
AT1G74950 (E=7e-073) JAZ2, TIFY10B | TIFY10B (273 aa)
       
      0.612
Bra025713
AT1G19180 (E=8e-084) JAZ1, TIFY10A | JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding (254 aa)
       
      0.612
Bra022254
AT3G17860 (E=1e-135) JAZ3, JAI3, TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3) (335 aa)
       
      0.612
Bra016520
AT1G19180 (E=8e-087) JAZ1, TIFY10A | JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding (259 aa)
       
      0.612
Bra016193
AT1G70700 (E=1e-063) JAZ9, TIFY7 | TIFY7 (249 aa)
       
      0.612
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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