STRINGSTRING
Bra002584 protein (Brassica rapa) - STRING interaction network
"Bra002584" - AT5G59080 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002584AT5G59080 (E=2e-042) | unknown protein (246 aa)    
Predicted Functional Partners:
Bra036057
AT3G50170 (E=6e-168) | unknown protein (477 aa)
           
  0.457
Bra036056
AT3G50120 (E=3e-287) | unknown protein (537 aa)
           
  0.457
Bra012907
AT3G50120 (E=2e-280) | unknown protein (531 aa)
           
  0.457
Bra024959
AT5G47160 (E=7e-051) | YDG/SRA domain-containing protein (370 aa)
           
  0.453
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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