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Bra002637 protein (Brassica rapa) - STRING interaction network
"Bra002637" - AT5G58560 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002637AT5G58560 (E=2e-123) | phosphatidate cytidylyltransferase family protein (302 aa)    
Predicted Functional Partners:
Bra034073
AT3G09560 (E=5e-232) | lipin family protein (857 aa)
       
  0.783
Bra033646
AT5G42870 (E=2e-210) | lipin family protein (837 aa)
       
  0.783
Bra029774
AT3G09560 (E=1e-242) | lipin family protein (813 aa)
       
  0.783
Bra027461
AT5G42870 (E=6e-230) | lipin family protein (823 aa)
       
  0.783
Bra022399
AT3G09560 (E=5e-092) | lipin family protein (216 aa)
       
  0.783
Bra011968
AT3G09560 (E=4e-030) | lipin family protein (192 aa)
       
  0.783
Bra039179
AT3G02600 (E=2e-155) LPP3, ATLPP3 | LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase (354 aa)
     
  0.759
Bra026782
AT1G15080 (E=1e-151) ATPAP2, ATLPP2, LPP2 | LPP2 (LIPID PHOSPHATE PHOSPHATASE 2); acid phosphatase/ phosphatidate phosphatase (312 aa)
     
  0.759
Bra024900
AT2G01180 (E=1e-152) ATPAP1, PAP1, LPP1, ATLPP1 | ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase (291 aa)
     
  0.759
Bra022295
AT3G18220 (E=6e-132) | phosphatidic acid phosphatase family protein / PAP2 family protein (305 aa)
     
  0.759
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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