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Bra002657 protein (Brassica rapa) - STRING interaction network
"Bra002657" - AT5G58360 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002657AT5G58360 (E=5e-051) ATOFP3, OFP3 | ATOFP3 (342 aa)    
Predicted Functional Partners:
Bra035202
AT1G79960 (E=2e-106) ATOFP14, OFP14 | OFP14 (OVATE FAMILY PROTEIN 14) (286 aa)
           
  0.604
Bra009428
AT5G04820 (E=2e-089) ATOFP13, OFP13 | OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13) (262 aa)
           
  0.602
Bra006930
AT3G52540 (E=3e-053) ATOFP18, OFP18 | OFP18 (OVATE FAMILY PROTEIN 18) (258 aa)
           
  0.602
Bra005302
AT2G36050 (E=9e-086) ATOFP15, OFP15 | OFP15 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15) (270 aa)
           
  0.601
Bra005611
AT2G32100 (E=1e-056) ATOFP16, OFP16 | OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16) (237 aa)
           
  0.600
Bra036908
AT4G14860 (E=5e-031) atofp11 | atofp11 (Arabidopsis thaliana ovate family protein 11) (214 aa)
           
  0.581
Bra032464
AT1G05420 (E=1e-058) ATOFP12, OFP12 | OFP12 (OVATE FAMILY PROTEIN 12) (227 aa)
           
  0.581
Bra028777
AT5G04890 (E=6e-041) RTM2 | RTM2 (RESTRICTED TEV MOVEMENT 2) (804 aa)
           
  0.568
Bra017277
AT2G35940 (E=6e-297) BLH1 | BLH1 (BEL1-LIKE HOMEODOMAIN 1); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor (675 aa)
       
 
  0.550
Bra018317
AT2G30395 (E=2e-073) ATOFP17, OFP17 | OFP17 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 17) (203 aa)
           
  0.550
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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