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Bra002669 protein (Brassica rapa) - STRING interaction network
"Bra002669" - AT5G58140 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002669AT5G58140 (E=1e-251) PHOT2, NPL1 | PHOT2 (PHOTOTROPIN 2); FMN binding / blue light photoreceptor/ kinase/ protein serine/threonine kinase (882 aa)    
Predicted Functional Partners:
Bra031714
AT1G10470 (E=2e-090) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (261 aa)
     
  0.872
Bra036579
AT5G26594 (E=9e-063) ARR24 | ARR24 (Arabidopsis response regulator 24); two-component response regulator (134 aa)
     
  0.872
Bra031714.1-P
AT1G10470 (E=2e-090) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (261 aa)
     
  0.872
Bra025708
AT1G19050 (E=2e-089) ARR7 | ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator (213 aa)
     
  0.872
Bra019932
AT1G10470 (E=1e-087) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (253 aa)
     
  0.872
Bra016526
AT1G19050 (E=2e-086) ARR7 | ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator (207 aa)
     
  0.872
Bra014649
AT3G57040 (E=9e-090) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator (234 aa)
     
  0.872
Bra012964
AT5G61380 (E=2e-121) TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator (576 aa)
     
  0.872
Bra003782
AT1G74890 (E=8e-069) ARR15 | ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator (197 aa)
     
  0.872
Bra001099
AT3G04280 (E=1e-051) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (143 aa)
     
  0.872
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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