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Bra002671 protein (Brassica rapa) - STRING interaction network
"Bra002671" - AT5G58110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002671AT5G58110 (E=5e-085) | ATPase activator/ chaperone binding (191 aa)    
Predicted Functional Partners:
Bra013774
AT4G24190 (E=0.0) SHD, HSP90.7 | SHD (SHEPHERD); ATP binding / unfolded protein binding (822 aa)
     
 
  0.985
Bra010500
AT4G24190 (E=8e-191) SHD, HSP90.7 | SHD (SHEPHERD); ATP binding / unfolded protein binding (786 aa)
     
 
  0.985
Bra036648
AT4G12400 (E=2e-216) | stress-inducible protein, putative (553 aa)
     
 
  0.981
Bra027022
AT1G62740 (E=4e-271) | stress-inducible protein, putative (567 aa)
     
 
  0.981
Bra026980
AT1G12270 (E=1e-137) | stress-inducible protein, putative (455 aa)
     
 
  0.981
Bra018477
AT4G12400 (E=9e-263) | stress-inducible protein, putative (553 aa)
     
 
  0.981
Bra012947
AT1G12270 (E=1e-012) | stress-inducible protein, putative (168 aa)
     
 
  0.981
Bra040027
AT3G07770 (E=0.0) | ATP binding (804 aa)
     
 
  0.979
Bra035599
AT5G56030 (E=1e-179) HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding (563 aa)
     
 
  0.979
Bra035593
AT5G56030 (E=1e-245) HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding (672 aa)
     
 
  0.979
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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