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Bra002692 protein (Brassica rapa) - STRING interaction network
"Bra002692" - AT5G57800 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002692AT5G57800 (E=1e-313) FLP1, YRE, CER3, WAX2 | CER3 (ECERIFERUM 3); binding / catalytic/ iron ion binding / oxidoreductase (630 aa)    
Predicted Functional Partners:
Bra004034
AT1G68530 (E=6e-279) CUT1, POP1, CER6, G2, KCS6 | KCS6 (3-KETOACYL-COA SYNTHASE 6); catalytic/ transferase, transferring acyl groups other than amino-acyl groups (492 aa)
     
   
  0.525
Bra016584
AT1G17840 (E=0.0) WBC11, ABCG11, DSO, COF1, ATWBC11 | WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter (701 aa)
     
   
  0.503
Bra023407
AT5G13390 (E=0.0) NEF1 | NEF1 (NO EXINE FORMATION 1) (1114 aa)
           
  0.499
Bra008832
AT5G13390 (E=8e-296) NEF1 | NEF1 (NO EXINE FORMATION 1) (1099 aa)
           
  0.499
Bra032284
AT1G49430 (E=0.0) LRD2, LACS2 | LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2); long-chain-fatty-acid-CoA ligase (666 aa)
           
  0.497
Bra007766
AT2G26250 (E=2e-290) FDH, KCS10 | KCS10 (3-KETOACYL-COA SYNTHASE 10); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups (547 aa)
     
   
  0.494
Bra007154
AT3G55360 (E=7e-174) CER10, ECR, ATTSC13, TSC13 | CER10; 3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid elongase/ trans-2-enoyl-CoA reductase (NADPH) (310 aa)
           
  0.493
Bra027898
AT1G57750 (E=2e-220) MAH1, CYP96A15 | CYP96A15 (CYTOCHROME P450 96 A1); midchain alkane hydroxylase/ oxygen binding (496 aa)
     
   
  0.486
Bra027897
AT1G57750 (E=2e-226) MAH1, CYP96A15 | CYP96A15 (CYTOCHROME P450 96 A1); midchain alkane hydroxylase/ oxygen binding (500 aa)
     
   
  0.486
Bra034054
AT3G09090 (E=0.0) DEX1 | DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding (883 aa)
           
  0.483
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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