STRINGSTRING
Bra002724 protein (Brassica rapa) - STRING interaction network
"Bra002724" - AT5G57500 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002724AT5G57500 (E=5e-145) | transferase, transferring glycosyl groups (270 aa)    
Predicted Functional Partners:
Bra033408
AT1G03520 (E=2e-206) | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (1314 aa)
         
  0.697
Bra022408
AT3G19280 (E=1e-207) FUT11, ATFUT11, FUCT1, FUCTA | FUT11 (FUCOSYLTRANSFERASE 11); 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase/ fucosyltransferase/ transferase, transferring glycosyl groups (506 aa)
         
  0.565
Bra018801
AT1G49710 (E=3e-238) FUT12, ATFUT12, FUCTB, FUCT2 | FUT12 (FUCOSYLTRANSFERASE 12); fucosyltransferase/ transferase, transferring glycosyl groups (624 aa)
         
  0.565
Bra016092
AT1G71990 (E=2e-197) FUT13, ATFUT13, FUCTC, FT4-M | FUT13 (FUCOSYLTRANSFERASE 13); fucosyltransferase/ transferase, transferring glycosyl groups (400 aa)
         
  0.565
Bra014210
AT1G49710 (E=8e-240) FUT12, ATFUT12, FUCTB, FUCT2 | FUT12 (FUCOSYLTRANSFERASE 12); fucosyltransferase/ transferase, transferring glycosyl groups (505 aa)
         
  0.565
Bra036442
AT3G03690 (E=4e-141) UNE7 | UNE7 (unfertilized embryo sac 7); acetylglucosaminyltransferase/ transferase, transferring glycosyl groups (281 aa)
         
  0.565
Bra030961
AT1G53100 (E=2e-075) | acetylglucosaminyltransferase (360 aa)
         
  0.565
Bra028449
AT5G39990 (E=4e-090) | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (371 aa)
         
  0.565
Bra028365
AT3G24040 (E=1e-200) | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (420 aa)
         
  0.565
Bra027260
AT3G15350 (E=1e-224) | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (425 aa)
         
  0.565
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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