STRINGSTRING
Bra002732 protein (Brassica rapa) - STRING interaction network
"Bra002732" - AT5G57370 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002732AT5G57370 (E=2e-029) | unknown protein (197 aa)    
Predicted Functional Partners:
Bra016955
AT2G41020 (E=1e-190) | WW domain-containing protein (799 aa)
     
    0.967
Bra003512
AT2G47610 (E=2e-108) | 60S ribosomal protein L7A (RPL7aA) (405 aa)
     
 
  0.871
Bra041007
AT1G44910 (E=6e-210) | protein binding (1047 aa)
     
    0.817
Bra022445
AT3G19670 (E=0.0) | protein binding (1119 aa)
     
    0.817
Bra016929
AT2G41500 (E=4e-240) LIS, EMB2776 | EMB2776; nucleotide binding (545 aa)
     
    0.814
Bra004625
AT2G41500 (E=1e-209) LIS, EMB2776 | EMB2776; nucleotide binding (489 aa)
     
    0.814
Bra025765
AT4G22350 (E=5e-231) | ubiquitin carboxyl-terminal hydrolase family protein (487 aa)
     
  0.802
Bra019379
AT4G22350 (E=6e-237) | ubiquitin carboxyl-terminal hydrolase family protein (487 aa)
     
  0.802
Bra013613
AT4G22350 (E=4e-239) | ubiquitin carboxyl-terminal hydrolase family protein (504 aa)
     
  0.802
Bra009060
AT5G10070 (E=1e-116) | RNase L inhibitor protein-related ; Probable pre-rRNA processing protein involved in ribosome biogenesis (296 aa)
       
      0.737
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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