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Bra002750 protein (Brassica rapa) - STRING interaction network
"Bra002750" - AT5G57200 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002750AT5G57200 (E=1e-252) | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related (593 aa)    
Predicted Functional Partners:
Bra034864
AT3G11130 (E=0.0) | clathrin heavy chain, putative (1488 aa)
     
  0.906
Bra034166
AT3G11130 (E=0.0) | clathrin heavy chain, putative (1448 aa)
     
  0.906
Bra029698
AT3G08530 (E=0.0) | clathrin heavy chain, putative (1479 aa)
     
  0.906
Bra001391
AT3G11130 (E=0.0) | clathrin heavy chain, putative (1452 aa)
     
  0.906
Bra001286
AT3G08530 (E=0.0) | clathrin heavy chain, putative (1484 aa)
     
  0.906
Bra037603
AT5G22780 (E=0.0) | adaptin family protein (1014 aa)
     
  0.901
Bra002427
AT5G22780 (E=0.0) | adaptin family protein (1007 aa)
     
  0.901
Bra017929
AT1G21570 (E=2e-227) | zinc finger (CCCH-type) family protein (1001 aa)
     
  0.900
Bra016455
AT1G20760 (E=5e-214) | calcium-binding EF hand family protein (1135 aa)
     
  0.899
Bra017933
AT1G21630 (E=5e-305) | calcium-binding EF hand family protein (1233 aa)
     
  0.898
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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