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Bra002762 protein (Brassica rapa) - STRING interaction network
"Bra002762" - AT5G57110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002762AT5G57110 (E=0.0) ACA8, AT-ACA8 | ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1073 aa)    
Predicted Functional Partners:
Bra040822
AT2G20050 (E=0.0) | ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphatase (966 aa)
     
  0.928
Bra035649
AT5G57110 (E=0.0) ACA8, AT-ACA8 | ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1076 aa)
   
 
   
0.801
Bra038801
AT4G20780 (E=2e-075) | calcium-binding protein, putative (261 aa)
     
 
  0.730
Bra020916
AT4G20780 (E=4e-074) | calcium-binding protein, putative (184 aa)
     
 
  0.730
Bra013470
AT4G20780 (E=5e-066) | calcium-binding protein, putative (188 aa)
     
 
  0.730
Bra026432
AT4G26470 (E=1e-108) | calcium ion binding (225 aa)
     
 
  0.723
Bra000985
AT3G01830 (E=1e-041) | calmodulin-related protein, putative (141 aa)
     
 
  0.722
Bra040770
AT1G32250 (E=7e-078) | calmodulin, putative (166 aa)
       
 
  0.722
Bra040379
AT3G07490 (E=1e-058) AGD11 | AGD11 (ARF-GAP domain 11); calcium ion binding (149 aa)
       
 
  0.722
Bra040169
AT4G17615 (E=8e-118) CBL1, ATCBL1, SCABP5 | CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding (213 aa)
       
 
  0.722
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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