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Bra002770 protein (Brassica rapa) - STRING interaction network
"Bra002770" - AT5G57020 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002770AT5G57020 (E=1e-236) NMT1, ATNMT1 | NMT1 (MYRISTOYL-COA-PROTEIN N-MYRISTOYLTRANSFERASE); glycylpeptide N-tetradecanoyltransferase/ myristoyltransferase ; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (428 aa)    
Predicted Functional Partners:
Bra019281
AT4G23650 (E=3e-262) CDPK6, CPK3 | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (532 aa)
       
 
  0.625
Bra019281.1-P
AT4G23650 (E=3e-262) CDPK6, CPK3 | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (532 aa)
       
 
  0.625
Bra013719
AT4G23650 (E=4e-259) CDPK6, CPK3 | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (525 aa)
       
 
  0.625
Bra020035
AT5G19360 (E=2e-281) CPK34 | CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (517 aa)
       
 
  0.622
Bra008910
AT5G12180 (E=3e-279) CPK17 | CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (522 aa)
       
 
  0.622
Bra002231
AT5G19360 (E=9e-278) CPK34 | CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase (517 aa)
       
 
  0.622
Bra040219
AT3G05420 (E=0.0) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding (665 aa)
       
 
  0.583
Bra039439
AT3G05420 (E=2e-309) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding (667 aa)
       
 
  0.583
Bra020582
AT3G05420 (E=1e-271) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding (667 aa)
       
 
  0.583
Bra001147
AT3G05420 (E=2e-309) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding (683 aa)
       
 
  0.583
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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