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Bra002801 protein (Brassica rapa) - STRING interaction network
"Bra002801" - AT5G56630 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra002801AT5G56630 (E=6e-252) PFK7 | PFK7 (PHOSPHOFRUCTOKINASE 7); 6-phosphofructokinase ; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (488 aa)    
Predicted Functional Partners:
Bra027452
AT5G42740 (E=6e-182) | glucose-6-phosphate isomerase, cytosolic (PGIC) (542 aa)
   
  0.989
Bra019214
AT4G24620 (E=0.0) PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase (613 aa)
   
  0.989
Bra013819
AT4G24620 (E=1e-314) PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase (616 aa)
   
  0.989
Bra025920
AT1G18270 (E=0.0) | ketose-bisphosphate aldolase class-II family protein (1340 aa)
   
 
  0.964
Bra031181
AT2G21330 (E=7e-209) | fructose-bisphosphate aldolase, putative (400 aa)
     
 
  0.951
Bra028543
AT3G52930 (E=2e-197) | fructose-bisphosphate aldolase, putative (358 aa)
     
 
  0.951
Bra026426
AT4G26530 (E=5e-187) | fructose-bisphosphate aldolase, putative (358 aa)
     
 
  0.951
Bra014340
AT2G01140 (E=4e-212) | fructose-bisphosphate aldolase, putative (389 aa)
     
 
  0.951
Bra011884
AT4G38970 (E=1e-169) | fructose-bisphosphate aldolase, putative (409 aa)
     
 
  0.951
Bra009517
AT5G03690 (E=4e-195) | fructose-bisphosphate aldolase, putative (359 aa)
     
 
  0.951
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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