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Bra002826 protein (Brassica rapa) - STRING interaction network
"Bra002826" - AT5G56290 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002826AT5G56290 (E=6e-213) PEX5, ATPEX5 | PEX5 (PEROXIN 5); peroxisome matrix targeting signal-1 binding / protein binding (762 aa)    
Predicted Functional Partners:
Bra035880
AT5G62810 (E=5e-154) PEX14, ATPEX14, PED2 | PEX14; protein binding / protein transporter (488 aa)
     
  0.986
Bra010124
AT5G62810 (E=8e-163) PEX14, ATPEX14, PED2 | PEX14; protein binding / protein transporter (531 aa)
     
  0.986
Bra032295
AT1G29260 (E=2e-185) PEX7, ATPEX7 | PEX7; peroxisome matrix targeting signal-2 binding / protein binding (317 aa)
     
  0.982
Bra010844
AT1G29260 (E=5e-185) PEX7, ATPEX7 | PEX7; peroxisome matrix targeting signal-2 binding / protein binding (317 aa)
     
  0.982
Bra031571
AT1G07370 (E=5e-142) PCNA1 | PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN); DNA binding / DNA polymerase processivity factor/ protein binding ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
       
      0.907
Bra018377
AT1G07370 (E=2e-144) PCNA1 | PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN); DNA binding / DNA polymerase processivity factor/ protein binding ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
       
      0.907
Bra037207
AT2G13360 (E=1e-217) AGT, AGT1 | AGT (ALANINE-GLYOXYLATE AMINOTRANSFERASE); alanine-glyoxylate transaminase/ serine-glyoxylate transaminase/ serine-pyruvate transaminase (401 aa)
     
 
  0.858
Bra013148
AT2G13360 (E=3e-217) AGT, AGT1 | AGT (ALANINE-GLYOXYLATE AMINOTRANSFERASE); alanine-glyoxylate transaminase/ serine-glyoxylate transaminase/ serine-pyruvate transaminase (401 aa)
     
 
  0.858
Bra040195
AT3G04460 (E=5e-095) PEX12, ATPEX12, APM4 | PEX12; protein binding / zinc ion binding ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (381 aa)
     
 
  0.830
Bra027788
AT3G04460 (E=2e-031) PEX12, ATPEX12, APM4 | PEX12; protein binding / zinc ion binding (112 aa)
     
 
  0.830
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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