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Bra002828 protein (Brassica rapa) - STRING interaction network
"Bra002828" - AT5G56270 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002828AT5G56270 (E=7e-260) WRKY2, ATWRKY2 | WRKY2; transcription factor (673 aa)    
Predicted Functional Partners:
Bra038007
AT1G55620 (E=0.0) CLC-F, ATCLC-F | CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride channel (785 aa)
           
  0.553
Bra030845
AT1G55620 (E=0.0) CLC-F, ATCLC-F | CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride channel (776 aa)
           
  0.553
Bra011615
AT4G35440 (E=2e-237) CLC-E, ATCLC-E, CLCE | CLC-E (CHLORIDE CHANNEL E); ion channel/ voltage-gated chloride channel (700 aa)
           
  0.477
Bra013187
AT2G04880 (E=1e-139) ZAP1, ATWRKY1, WRKY1 | ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1); transcription activator/ transcription factor/ zinc ion binding (447 aa)
         
0.458
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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