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Bra002834 protein (Brassica rapa) - STRING interaction network
"Bra002834" - AT5G56220 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002834AT5G56220 (E=0.0) | nucleoside-triphosphatase/ nucleotide binding (972 aa)    
Predicted Functional Partners:
Bra008333
AT1G77760 (E=0.0) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (906 aa)
       
      0.697
Bra002835
AT5G56210 (E=3e-072) WIP2 | WIP2 (WPP-domain Interacting Protein 2); protein heterodimerization/ protein homodimerization (276 aa)
           
  0.607
Bra002833
AT5G56230 (E=1e-065) PRA1.G2 | PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2) (185 aa)
           
  0.607
Bra002832
AT5G56240 (E=2e-279) | INVOLVED IN- biological_process unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- HAP8 (HAPLESS 8) (TAIR-AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species- Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source- NCBI BLink). (969 aa)
           
  0.581
Bra015656
AT1G77760 (E=1e-253) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase (890 aa)
       
      0.489
Bra003670
AT1G77760 (E=0.0) NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE 1); nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (910 aa)
       
      0.489
Bra035611
AT5G56250 (E=1e-199) HAP8 | HAP8 (HAPLESS 8) (729 aa)
           
  0.483
Bra035610
AT5G56240 (E=6e-103) | INVOLVED IN- biological_process unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- HAP8 (HAPLESS 8) (TAIR-AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species- Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source- NCBI BLink). (958 aa)
           
  0.483
Bra028941
AT5G56250 (E=7e-248) HAP8 | HAP8 (HAPLESS 8) (753 aa)
           
  0.483
Bra026434
AT4G26455 (E=5e-135) WIP1 | WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization (495 aa)
           
  0.472
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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