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Bra002933 protein (Brassica rapa) - STRING interaction network
"Bra002933" - AT5G55090 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002933AT5G55090 (E=2e-169) MAPKKK15 | MAPKKK15; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (441 aa)    
Predicted Functional Partners:
Bra000209
AT2G40860 (E=0.0) | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (655 aa)
     
0.949
Bra036791
AT3G51560 (E=0.0) | ATP binding / protein binding / transmembrane receptor (1994 aa)
     
  0.947
Bra035695
AT3G47090 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (999 aa)
     
  0.947
Bra035694
AT3G47090 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1002 aa)
     
  0.947
Bra020518
AT5G25930 (E=0.0) | leucine-rich repeat family protein / protein kinase family protein (973 aa)
     
  0.947
Bra009240
AT5G06940 (E=0.0) | leucine-rich repeat family protein (860 aa)
     
  0.947
Bra039063
AT3G28040 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1014 aa)
     
0.921
Bra037076
AT3G47090 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1011 aa)
     
0.921
Bra030846
AT1G55610 (E=0.0) BRL1 | BRL1 (BRI 1 LIKE); kinase (1165 aa)
     
0.921
Bra010067
AT5G62230 (E=4e-222) ERL1 | ERL1 (ERECTA-LIKE 1); kinase (702 aa)
     
0.921
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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