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Bra002982 protein (Brassica rapa) - STRING interaction network
"Bra002982" - AT5G54500 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra002982AT5G54500 (E=4e-098) FQR1 | FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1); FMN binding / oxidoreductase, acting on NADH or NADPH, quinone or similar compound as acceptor (204 aa)    
Predicted Functional Partners:
Bra016349
AT1G23360 (E=4e-113) | UbiE/COQ5 methyltransferase family protein (264 aa)
       
    0.605
Bra020452
AT5G57300 (E=2e-036) | UbiE/COQ5 methyltransferase family protein (194 aa)
       
    0.543
Bra006827
AT5G57300 (E=2e-145) | UbiE/COQ5 methyltransferase family protein (290 aa)
       
    0.543
Bra002740
AT5G57300 (E=4e-142) | UbiE/COQ5 methyltransferase family protein (289 aa)
       
    0.543
Bra032019
AT3G03080 (E=1e-159) | NADP-dependent oxidoreductase, putative (336 aa)
     
        0.497
Bra024723
AT1G26320 (E=8e-184) | NADP-dependent oxidoreductase, putative (351 aa)
     
        0.497
Bra023591
AT5G16960 (E=2e-170) | NADP-dependent oxidoreductase, putative (350 aa)
     
        0.497
Bra022471
AT1G65560 (E=6e-172) | allyl alcohol dehydrogenase, putative (351 aa)
     
        0.497
Bra018802
AT1G49670 (E=0.0) NQR | NQR; binding / catalytic/ oxidoreductase/ zinc ion binding (629 aa)
     
        0.497
Bra014212
AT1G49670 (E=2e-177) NQR | NQR; binding / catalytic/ oxidoreductase/ zinc ion binding (650 aa)
     
        0.497
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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