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Bra003079 protein (Brassica rapa) - STRING interaction network
"Bra003079" - AT5G53150 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003079AT5G53150 (E=8e-180) | heat shock protein binding / unfolded protein binding (709 aa)    
Predicted Functional Partners:
Bra004709
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding (657 aa)
   
  0.970
Bra041089
AT2G44440 (E=8e-039) | emsy N terminus domain-containing protein / ENT domain-containing protein (300 aa)
   
  0.889
Bra039679
AT1G79930 (E=0.0) HSP91 | HSP91; ATP binding (818 aa)
   
  0.888
Bra038734
AT3G12580 (E=0.0) HSP70 | HSP70 (heat shock protein 70); ATP binding (650 aa)
   
  0.888
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
   
  0.888
Bra035909
AT5G02500 (E=3e-215) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (572 aa)
   
  0.888
Bra035470
AT5G02500 (E=6e-191) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (596 aa)
   
  0.888
Bra034104
AT5G02500 (E=9e-054) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding (121 aa)
   
  0.888
Bra031657
AT1G09080 (E=0.0) BIP3 | BIP3; ATP binding (673 aa)
   
  0.888
Bra028628
AT5G09590 (E=0.0) MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding (680 aa)
   
  0.888
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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