STRINGSTRING
Bra003204 protein (Brassica rapa) - STRING interaction network
"Bra003204" - AT3G55010 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003204AT3G55010 (E=9e-174) ATPURM, PUR5 | PUR5; ATP binding / phosphoribosylformylglycinamidine cyclo-ligase (385 aa)    
Predicted Functional Partners:
Bra015924
AT1G74260 (E=0.0) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (1516 aa)
   
  0.999
Bra003809
AT1G74260 (E=0.0) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (1380 aa)
   
  0.999
Bra000013
AT2G37690 (E=7e-303) | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative (671 aa)
 
  0.999
Bra017161
AT2G37690 (E=0.0) | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative (691 aa)
 
  0.999
Bra037583
AT1G74260 (E=4e-066) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (850 aa)
   
  0.999
Bra011888
AT4G38880 (E=8e-259) ATASE3 | ATASE3 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 3); amidophosphoribosyltransferase (543 aa)
 
  0.996
Bra011558
AT4G34740 (E=2e-280) ATASE2, CIA1, ATPURF2 | ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2); amidophosphoribosyltransferase (555 aa)
 
  0.996
Bra001980
AT2G16570 (E=9e-271) ATASE, ATASE1 | ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1); amidophosphoribosyltransferase (557 aa)
 
  0.996
Bra023904
AT3G21110 (E=5e-212) PUR7, PURC, ATPURC | PUR7 (PURIN 7); phosphoribosylaminoimidazolesuccinocarboxamide synthase (408 aa)
   
  0.996
Bra001811
AT3G21110 (E=6e-216) PUR7, PURC, ATPURC | PUR7 (PURIN 7); phosphoribosylaminoimidazolesuccinocarboxamide synthase (413 aa)
   
  0.996
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (8%) [HD]