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Bra003210 protein (Brassica rapa) - STRING interaction network
"Bra003210" - AT3G55380 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003210AT3G55380 (E=8e-085) UBC14 | UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase (167 aa)    
Predicted Functional Partners:
Bra020111
AT5G20570 (E=1e-061) ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX 1); protein binding (119 aa)
     
  0.965
Bra006565
AT5G20570 (E=6e-060) ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX 1); protein binding (118 aa)
     
  0.965
Bra002312
AT5G20570 (E=2e-058) ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX 1); protein binding (118 aa)
     
  0.965
Bra023205
AT4G24940 (E=3e-050) SAE1A, AT-SAE1-1, ATSAE1A | SAE1A (SUMO-ACTIVATING ENZYME 1A); SUMO activating enzyme (215 aa)
     
  0.954
Bra035556
AT5G55130 (E=4e-240) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (470 aa)
     
  0.954
Bra002930
AT5G55130 (E=3e-242) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (466 aa)
     
  0.954
Bra039210
AT2G23740 (E=5e-041) | nucleic acid binding / transcription factor/ zinc ion binding (306 aa)
       
  0.932
Bra039532
AT3G47110 (E=2e-165) | leucine-rich repeat transmembrane protein kinase, putative (959 aa)
       
  0.913
Bra039531
AT3G47090 (E=6e-148) | leucine-rich repeat transmembrane protein kinase, putative (967 aa)
       
  0.913
Bra039525
AT5G44700 (E=0.0) EDA23, GSO2 | GSO2 (GASSHO 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (1243 aa)
       
  0.913
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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