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Bra003265 protein (Brassica rapa) - STRING interaction network
"Bra003265" - AT3G57040 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003265AT3G57040 (E=3e-085) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator (240 aa)    
Predicted Functional Partners:
Bra023876
AT3G21510 (E=2e-074) AHP1 | AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase (154 aa)
       
  0.985
Bra033398
AT1G03430 (E=2e-080) AHP5 | AHP5 (HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5); histidine phosphotransfer kinase (156 aa)
       
  0.985
Bra025394
AT3G29350 (E=3e-077) AHP2 | AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2); histidine phosphotransfer kinase/ protein binding / signal transducer (156 aa)
       
  0.985
Bra040986
AT5G39500 (E=0.0) | pattern formation protein, putative (1433 aa)
       
      0.952
Bra028434
AT5G39500 (E=0.0) | pattern formation protein, putative (1675 aa)
       
      0.952
Bra039210
AT2G23740 (E=5e-041) | nucleic acid binding / transcription factor/ zinc ion binding (306 aa)
       
  0.770
Bra018060
AT3G48430 (E=0.0) REF6 | REF6 (RELATIVE OF EARLY FLOWERING 6); nucleic acid binding / transcription factor/ zinc ion binding (1385 aa)
       
  0.709
Bra009474
AT5G04240 (E=0.0) ELF6 | ELF6 (EARLY FLOWERING 6); transcription factor (1160 aa)
       
  0.709
Bra032148
AT2G23740 (E=0.0) | nucleic acid binding / transcription factor/ zinc ion binding (1366 aa)
       
  0.695
Bra038293
AT3G45260 (E=2e-163) | zinc finger (C2H2 type) family protein (886 aa)
       
  0.676
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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