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Bra003278 protein (Brassica rapa) - STRING interaction network
"Bra003278" - AT3G57390 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003278AT3G57390 (E=2e-026) AGL18 | AGL18; transcription factor (61 aa)    
Predicted Functional Partners:
Bra037232
AT2G18193 (E=2e-128) | AAA-type ATPase family protein (737 aa)
       
  0.762
Bra039676
AT1G53510 (E=3e-271) ATMPK18 | ATMPK18; MAP kinase (588 aa)
     
  0.762
Bra039629
AT2G18170 (E=2e-199) ATMPK7, MPK7 | ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7); MAP kinase/ kinase (368 aa)
     
  0.762
Bra039292
AT2G46070 (E=6e-210) ATMPK12, MAPK12, MPK12 | MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12); MAP kinase/ kinase (372 aa)
     
  0.762
Bra038281
AT3G45640 (E=1e-148) ATMPK3, MPK3 | ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3); MAP kinase/ kinase/ protein binding / protein kinase (333 aa)
     
  0.762
Bra038128
AT1G53510 (E=8e-225) ATMPK18 | ATMPK18; MAP kinase (565 aa)
     
  0.762
Bra037234
AT2G18170 (E=9e-200) ATMPK7, MPK7 | ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7); MAP kinase/ kinase (368 aa)
     
  0.762
Bra036394
AT4G01370 (E=8e-034) ATMPK4, MPK4 | ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase (116 aa)
     
  0.762
Bra035437
AT1G59580 (E=6e-202) ATMPK2, MPK2 | ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2); MAP kinase/ kinase/ protein kinase (370 aa)
     
  0.762
Bra035233
AT4G11330 (E=1e-197) ATMPK5 | ATMPK5 (MAP KINASE 5); MAP kinase/ kinase (468 aa)
     
  0.762
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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