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Bra003302 protein (Brassica rapa) - STRING interaction network
"Bra003302" - AT3G57880 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003302AT3G57880 (E=0.0) | C2 domain-containing protein (774 aa)    
Predicted Functional Partners:
Bra028852
AT5G03070 (E=3e-142) IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9); binding (527 aa)
           
  0.497
Bra018570
AT1G09270 (E=6e-270) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (542 aa)
           
  0.497
Bra038043
AT4G16143 (E=3e-276) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (534 aa)
           
  0.441
Bra033534
AT4G16143 (E=8e-283) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (530 aa)
           
  0.441
Bra019965
AT1G10030 (E=4e-038) ERG28 | ERG28 (Arabidopsis homolog of yeast ergosterol28) (164 aa)
           
  0.429
Bra018466
AT1G10030 (E=7e-059) ERG28 | ERG28 (Arabidopsis homolog of yeast ergosterol28) (129 aa)
           
  0.429
Bra026267
AT4G28310 (E=6e-054) | unknown protein (175 aa)
           
  0.426
Bra020454
AT5G57290 (E=3e-033) | 60S acidic ribosomal protein P3 (RPP3B) (120 aa)
           
  0.426
Bra010375
AT4G28310 (E=4e-052) | unknown protein (210 aa)
           
  0.426
Bra009023
AT5G10560 (E=0.0) | glycosyl hydrolase family 3 protein (792 aa)
           
  0.426
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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