STRINGSTRING
Bra003319 protein (Brassica rapa) - STRING interaction network
"Bra003319" - AT3G58110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003319AT3G58110 (E=8e-136) | unknown protein (781 aa)    
Predicted Functional Partners:
Bra039578
AT1G35720 (E=2e-117) ANNAT1, OXY5, ATOXY5 | ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerization (265 aa)
       
      0.612
Bra036764
AT1G35720 (E=4e-163) ANNAT1, OXY5, ATOXY5 | ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerization (317 aa)
       
      0.612
Bra034402
AT1G35720 (E=3e-165) ANNAT1, OXY5, ATOXY5 | ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerization (325 aa)
       
      0.612
Bra033961
AT1G68090 (E=1e-163) ANNAT5, ANN5 | ANN5; calcium ion binding / calcium-dependent phospholipid binding (316 aa)
       
      0.612
Bra031890
AT5G65020 (E=5e-163) ANNAT2 | ANNAT2 (Annexin Arabidopsis 2); calcium ion binding / calcium-dependent phospholipid binding (316 aa)
       
      0.612
Bra024346
AT5G65020 (E=2e-170) ANNAT2 | ANNAT2 (Annexin Arabidopsis 2); calcium ion binding / calcium-dependent phospholipid binding (316 aa)
       
      0.612
Bra017103
AT2G38750 (E=1e-143) ANNAT4 | ANNAT4 (ANNEXIN ARABIDOPSIS 4); calcium ion binding / calcium-dependent phospholipid binding (320 aa)
       
      0.612
Bra017102
AT2G38760 (E=6e-154) ANNAT3 | ANNAT3 (ANNEXIN ARABIDOPSIS 3); calcium ion binding / calcium-dependent phospholipid binding (319 aa)
       
      0.612
80A08_19
AT5G10220 (E=4e-158) ANN6, ANNAT6 | ANN6 (ANNEXIN ARABIDOPSIS 6); calcium ion binding / calcium-dependent phospholipid binding (318 aa)
       
      0.612
80A08_20
AT5G10230 (E=1e-157) ANNAT7, ANN7 | ANNAT7 (ANNEXIN ARABIDOPSIS 7); calcium ion binding / calcium-dependent phospholipid binding (316 aa)
       
      0.612
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (8%) [HD]