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Bra003369 protein (Brassica rapa) - STRING interaction network
"Bra003369" - AT3G59280 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003369AT3G59280 (E=9e-047) TXR1 | TXR1 (THAXTOMIN A RESISTANT 1) (148 aa)    
Predicted Functional Partners:
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
       
  0.977
Bra034080
AT3G09700 (E=7e-043) | DNAJ heat shock N-terminal domain-containing protein (112 aa)
     
  0.965
Bra028855
AT5G03030 (E=2e-041) | DNAJ heat shock N-terminal domain-containing protein (112 aa)
     
  0.965
Bra023030
AT2G35795 (E=2e-049) | DNAJ heat shock N-terminal domain-containing protein (115 aa)
     
  0.965
Bra009555
AT5G03030 (E=9e-038) | DNAJ heat shock N-terminal domain-containing protein (108 aa)
     
  0.965
Bra005744
AT5G03030 (E=9e-040) | DNAJ heat shock N-terminal domain-containing protein (142 aa)
     
  0.965
Bra036674
AT2G36070 (E=1e-099) ATTIM44-2 | ATTIM44-2; protein-transmembrane transporting ATPase (413 aa)
     
  0.873
Bra036478
AT2G36070 (E=2e-173) ATTIM44-2 | ATTIM44-2; protein-transmembrane transporting ATPase (462 aa)
     
  0.873
Bra030980
AT1G20350 (E=3e-053) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (217 aa)
     
  0.842
Bra028975
AT4G26670 (E=5e-053) | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (235 aa)
     
  0.842
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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