STRINGSTRING
Bra003410 protein (Brassica rapa) - STRING interaction network
"Bra003410" - AT3G60420 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra003410AT3G60420 (E=8e-060) | LOCATED IN- cellular_component unknown; EXPRESSED IN- 17 plant structures; EXPRESSED DURING- 10 growth stages; CONTAINS InterPro DOMAIN/s- Phosphoglycerate mutase (InterPro-IPR013078), PRIB5 (InterPro-IPR012398); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G60450.1); Has 181 Blast hits to 179 proteins in 72 species- Archae - 0; Bacteria - 53; Metazoa - 4; Fungi - 34; Plants - 34; Viruses - 0; Other Eukaryotes - 56 (source- NCBI BLink). (255 aa)    
Predicted Functional Partners:
Bra037042
AT4G32770 (E=1e-260) VTE1, ATSDX1 | VTE1 (VITAMIN E DEFICIENT 1); tocopherol cyclase (490 aa)
   
          0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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