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Bra003517 protein (Brassica rapa) - STRING interaction network
"Bra003517" - AT3G62960 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003517AT3G62960 (E=3e-051) | glutaredoxin family protein (102 aa)    
Predicted Functional Partners:
Bra029067
AT5G53460 (E=0.0) GLT1 | GLT1; glutamate synthase (NADH) (2199 aa)
       
  0.924
Bra004639
AT2G41680 (E=7e-262) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (521 aa)
   
  0.914
Bra000234
AT2G41680 (E=3e-246) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (511 aa)
   
  0.914
Bra025055
AT2G21790 (E=0.0) R1, RNR1, CLS8, ATRNR1 | RNR1 (RIBONUCLEOTIDE REDUCTASE 1); ATP binding / protein binding / ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (843 aa)
   
 
  0.832
Bra010689
AT2G21790 (E=0.0) R1, RNR1, CLS8, ATRNR1 | RNR1 (RIBONUCLEOTIDE REDUCTASE 1); ATP binding / protein binding / ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (815 aa)
   
 
  0.832
Bra009276
AT2G21790 (E=5e-155) R1, RNR1, CLS8, ATRNR1 | RNR1 (RIBONUCLEOTIDE REDUCTASE 1); ATP binding / protein binding / ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (725 aa)
   
 
  0.832
Bra032979
AT3G27060 (E=5e-184) TSO2 | TSO2 (TSO meaning ’ugly’ in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding (332 aa)
   
  0.787
Bra019279
AT3G27060 (E=1e-011) TSO2 | TSO2 (TSO meaning ’ugly’ in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding (99 aa)
   
  0.787
Bra014962
AT3G23580 (E=1e-182) RNR2, RNR2A | RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase (343 aa)
   
  0.787
Bra012265
AT2G32295 (E=6e-044) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- integral to membrane; CONTAINS InterPro DOMAIN/s- EXS, C-terminal (InterPro-IPR004342); BEST Arabidopsis thaliana protein match is- EXS family protein / ERD1/XPR1/SYG1 family protein (TAIR-AT5G35730.1); Has 582 Blast hits to 577 proteins in 138 species- Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 177; Plants - 106; Viruses - 0; Other Eukaryotes - 76 (source- NCBI BLink). (213 aa)
   
  0.787
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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