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Bra003547 protein (Brassica rapa) - STRING interaction network
"Bra003547" - AT1G80050 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003547AT1G80050 (E=2e-091) APT2, ATAPT2 | APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2); adenine phosphoribosyltransferase/ phosphate transmembrane transporter (192 aa)    
Predicted Functional Partners:
Bra027795
AT1G63660 (E=6e-286) | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative (530 aa)
   
  0.991
Bra013309
AT4G18440 (E=1e-258) | adenylosuccinate lyase, putative / adenylosuccinase, putative (533 aa)
   
  0.973
Bra012596
AT4G18440 (E=4e-255) | adenylosuccinate lyase, putative / adenylosuccinase, putative (531 aa)
   
  0.973
Bra005126
AT2G38280 (E=0.0) FAC1, ATAMPD | FAC1 (EMBRYONIC FACTOR1); AMP deaminase (841 aa)
       
  0.956
Bra039707
AT4G14930 (E=8e-153) | acid phosphatase survival protein SurE, putative (307 aa)
       
  0.940
Bra036915
AT4G14930 (E=4e-142) | acid phosphatase survival protein SurE, putative (312 aa)
       
  0.940
Bra016030
AT1G72880 (E=2e-153) | acid phosphatase survival protein SurE, putative (376 aa)
       
  0.940
Bra008057
AT1G72880 (E=1e-161) | acid phosphatase survival protein SurE, putative (381 aa)
       
  0.940
Bra003865
AT1G72880 (E=1e-167) | acid phosphatase survival protein SurE, putative (380 aa)
       
  0.940
Bra019374
AT4G22570 (E=2e-090) APT3 | APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3); adenine phosphoribosyltransferase (238 aa)
   
 
0.937
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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