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Bra003551 protein (Brassica rapa) - STRING interaction network
"Bra003551" - AT1G80100 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003551AT1G80100 (E=8e-067) AHP6 | AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups (154 aa)    
Predicted Functional Partners:
Bra024849
AT2G01830 (E=0.0) WOL, CRE1, WOL1, AHK4, ATCRE1 | WOL (WOODEN LEG); cytokinin receptor/ osmosensor/ phosphoprotein phosphatase/ protein histidine kinase (1040 aa)
       
  0.978
Bra036579
AT5G26594 (E=9e-063) ARR24 | ARR24 (Arabidopsis response regulator 24); two-component response regulator (134 aa)
       
  0.975
Bra001099
AT3G04280 (E=1e-051) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (143 aa)
       
  0.975
Bra035381
AT5G35750 (E=0.0) AHK2 | AHK2 (ARABIDOPSIS HISTIDINE KINASE 2); cytokinin receptor/ osmosensor/ protein histidine kinase (1149 aa)
       
  0.974
Bra013186
AT5G35750 (E=0.0) AHK2 | AHK2 (ARABIDOPSIS HISTIDINE KINASE 2); cytokinin receptor/ osmosensor/ protein histidine kinase (1097 aa)
       
  0.973
Bra030037
AT1G27320 (E=0.0) AHK3 | AHK3 (ARABIDOPSIS HISTIDINE KINASE 3); cytokinin receptor/ osmosensor/ protein histidine kinase (1017 aa)
       
  0.973
Bra040206
AT3G04280 (E=2e-020) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (179 aa)
       
  0.967
Bra040204
AT3G04280 (E=1e-053) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (136 aa)
       
  0.967
Bra040134
AT3G04580 (E=0.0) EIN4 | EIN4 (ETHYLENE INSENSITIVE 4); ethylene binding / glycogen synthase kinase 3/ protein histidine kinase/ receptor (766 aa)
       
  0.967
Bra034589
AT1G27320 (E=2e-025) AHK3 | AHK3 (ARABIDOPSIS HISTIDINE KINASE 3); cytokinin receptor/ osmosensor/ protein histidine kinase (243 aa)
       
  0.967
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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