STRINGSTRING
Bra003567 protein (Brassica rapa) - STRING interaction network
"Bra003567" - AT1G80460 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003567AT1G80460 (E=1e-289) NHO1, GLI1 | NHO1 (nonhost resistance to P. s. phaseolicola 1); carbohydrate kinase/ glycerol kinase (522 aa)    
Predicted Functional Partners:
Bra023553
AT5G16120 (E=6e-166) | hydrolase, alpha/beta fold family protein (554 aa)
       
  0.940
Bra015989
AT1G73480 (E=1e-193) | hydrolase, alpha/beta fold family protein (407 aa)
       
  0.940
Bra008947
AT5G11650 (E=4e-184) | hydrolase, alpha/beta fold family protein (390 aa)
       
  0.940
Bra003843
AT1G73480 (E=5e-192) | hydrolase, alpha/beta fold family protein (382 aa)
       
  0.940
Bra017077
AT2G39400 (E=3e-164) | hydrolase, alpha/beta fold family protein (311 aa)
       
  0.940
Bra017076
AT2G39420 (E=1e-168) | esterase/lipase/thioesterase family protein (317 aa)
       
  0.940
Bra008307
AT1G77420 (E=1e-192) | hydrolase, alpha/beta fold family protein (382 aa)
       
  0.940
Bra000132
AT2G39420 (E=5e-166) | esterase/lipase/thioesterase family protein (306 aa)
       
  0.940
Bra007707
AT3G62860 (E=3e-153) | esterase/lipase/thioesterase family protein (561 aa)
       
  0.931
Bra014388
AT3G62860 (E=1e-148) | esterase/lipase/thioesterase family protein (303 aa)
       
  0.930
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (7%) [HD]