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Bra003595 protein (Brassica rapa) - STRING interaction network
"Bra003595" - AT1G80950 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003595AT1G80950 (E=3e-192) | phospholipid/glycerol acyltransferase family protein (398 aa)    
Predicted Functional Partners:
Bra027001
AT1G63050 (E=6e-242) | membrane bound O-acyl transferase (MBOAT) family protein (467 aa)
         
  0.946
Bra019778
AT1G12640 (E=3e-244) | membrane bound O-acyl transferase (MBOAT) family protein (466 aa)
         
  0.943
Bra008174
AT1G75020 (E=6e-172) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (382 aa)
         
  0.932
Bra022365
AT3G18850 (E=8e-182) LPAT5 | LPAT5; acyltransferase (346 aa)
         
  0.930
Bra003775
AT1G75020 (E=3e-171) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (380 aa)
         
  0.930
Bra000394
AT2G45670 (E=1e-252) | calcineurin B subunit-related (527 aa)
       
0.918
Bra039323
AT2G45670 (E=3e-255) | calcineurin B subunit-related (531 aa)
       
0.917
Bra009491
AT5G04040 (E=0.0) SDP1 | SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase (1425 aa)
     
 
    0.896
Bra011598
AT5G60620 (E=5e-213) | phospholipid/glycerol acyltransferase family protein (376 aa)
       
  0.757
Bra002465
AT5G60620 (E=3e-118) | phospholipid/glycerol acyltransferase family protein (351 aa)
       
  0.757
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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