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Bra003618 protein (Brassica rapa) - STRING interaction network
"Bra003618" - AT1G16470 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003618AT1G16470 (E=6e-095) PAB1 | PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase (245 aa)    
Predicted Functional Partners:
Bra003428
AT3G60820 (E=5e-121) PBF1 | PBF1; peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
   
  0.999
Bra014468
AT3G60820 (E=1e-120) PBF1 | PBF1; peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
   
  0.999
Bra007565
AT3G60820 (E=1e-121) PBF1 | PBF1; peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
   
  0.999
Bra039563
AT4G15160 (E=3e-040) | lipid binding / structural constituent of cell wall (291 aa)
     
  0.999
Bra038089
AT4G15160 (E=2e-043) | lipid binding / structural constituent of cell wall (256 aa)
     
  0.999
Bra031326
AT3G22110 (E=4e-022) PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase (99 aa)
     
  0.999
Bra038565
AT1G21720 (E=9e-114) PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
     
  0.999
Bra017945
AT1G21720 (E=1e-104) PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase (420 aa)
     
  0.999
Bra016408
AT1G21720 (E=4e-113) PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
     
  0.999
Bra012292
AT1G21720 (E=6e-113) PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
     
  0.999
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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