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Bra003629 protein (Brassica rapa) - STRING interaction network
"Bra003629" - AT1G78990 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra003629AT1G78990 (E=2e-231) | transferase family protein (455 aa)    
Predicted Functional Partners:
Bra020123
AT5G20700 (E=8e-110) | senescence-associated protein-related (250 aa)
           
  0.541
Bra003779
AT1G74940 (E=3e-091) | senescence-associated protein-related (222 aa)
           
  0.541
Bra002322
AT5G20700 (E=3e-116) | senescence-associated protein-related (248 aa)
           
  0.541
Bra004623
AT2G41475 (E=7e-082) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; CONTAINS InterPro DOMAIN/s- Lipase/lipooxygenase, PLAT/LH2 (InterPro-IPR008976), Embryo-specific 3 (InterPro-IPR010417); BEST Arabidopsis thaliana protein match is- embryo-specific protein-related (TAIR-AT5G62200.1); Has 60 Blast hits to 60 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (177 aa)
           
  0.475
Bra021891
AT2G34050 (E=9e-117) | INVOLVED IN- protein complex assembly; LOCATED IN- mitochondrion, chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 9 growth stages; CONTAINS InterPro DOMAIN/s- ATP11 (InterPro-IPR010591); Has 224 Blast hits to 224 proteins in 121 species- Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 80; Plants - 18; Viruses - 0; Other Eukaryotes - 39 (source- NCBI BLink). (245 aa)
           
  0.474
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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