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Bra003648 protein (Brassica rapa) - STRING interaction network
"Bra003648" - AT1G78340 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003648AT1G78340 (E=5e-055) ATGSTU22 | ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase (149 aa)    
Predicted Functional Partners:
Bra031676
AT1G09640 (E=9e-204) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
  0.761
Bra030790
AT1G57720 (E=6e-190) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (566 aa)
       
  0.761
Bra020005
AT1G09640 (E=4e-193) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
  0.761
GR1
AT3G24170 (E=3e-234) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase ; Maintains high levels of reduced glutathione in the cytosol (486 aa)
       
  0.738
Bra014801
AT3G54660 (E=5e-268) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (615 aa)
       
  0.738
Bra007087
AT3G54660 (E=1e-278) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (563 aa)
       
  0.738
Bra001931
AT3G24170 (E=4e-241) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase (484 aa)
       
  0.738
Bra036260
AT2G02930 (E=4e-104) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
       
  0.731
Bra036259
AT2G02930 (E=6e-098) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase (213 aa)
       
  0.731
Bra033361
AT1G02950 (E=3e-074) ATGSTF4, GST31 | ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4); glutathione transferase (187 aa)
       
  0.731
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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