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Bra003677 protein (Brassica rapa) - STRING interaction network
"Bra003677" - AT1G77610 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003677AT1G77610 (E=9e-183) | glucose-6-phosphate/phosphate translocator-related (336 aa)    
Predicted Functional Partners:
Bra012237
AT1G76340 (E=3e-142) | integral membrane family protein (346 aa)
           
  0.483
Bra010229
AT4G31600 (E=1e-106) | UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related (393 aa)
     
   
  0.474
Bra020078
AT5G19980 (E=2e-086) | integral membrane family protein (305 aa)
           
  0.473
Bra015761
AT1G76340 (E=2e-107) | integral membrane family protein (271 aa)
           
  0.473
Bra008249
AT1G76340 (E=1e-008) | integral membrane family protein (258 aa)
           
  0.473
Bra006528
AT5G19980 (E=1e-147) | integral membrane family protein (337 aa)
           
  0.473
Bra006527
AT5G19980 (E=2e-032) | integral membrane family protein (212 aa)
           
  0.473
Bra002278
AT5G19980 (E=4e-147) | integral membrane family protein (344 aa)
           
  0.473
Bra010028
AT5G49570 (E=0.0) AtPNG1 | AtPNG1 (Arabidopsis thaliana peptide-N-glycanase 1); catalytic/ peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase (722 aa)
           
  0.472
Bra014626
AT2G48020 (E=6e-036) | sugar transporter, putative (141 aa)
     
   
  0.425
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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