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Bra003680 protein (Brassica rapa) - STRING interaction network
"Bra003680" - AT1G77520 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003680AT1G77520 (E=5e-139) | O-methyltransferase family 2 protein (378 aa)    
Predicted Functional Partners:
Bra037119
AT5G67310 (E=1e-182) CYP81G1 | CYP81G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (776 aa)
         
  0.549
Bra021482
AT3G01090 (E=4e-196) AKIN10, KIN10 | AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase (638 aa)
         
  0.549
Bra040821
AT3G26300 (E=8e-237) CYP71B34 | CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (502 aa)
         
  0.545
Bra040819
AT3G26330 (E=3e-221) CYP71B37 | CYP71B37; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (497 aa)
         
  0.545
Bra040720
AT1G13710 (E=3e-267) CYP78A5 | CYP78A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (516 aa)
         
  0.545
Bra040154
AT5G35917 (E=5e-018) CYP79A3P | CYP79A3P; electron carrier/ heme binding / iron ion binding / monooxygenase (53 aa)
         
  0.545
Bra039930
AT2G14100 (E=5e-164) CYP705A13 | CYP705A13; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (498 aa)
         
  0.545
Bra039495
AT5G36220 (E=6e-255) CYP81D1, CYP91A1 | CYP81D1 (CYTOCHROME P450 81D1); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (501 aa)
         
  0.545
Bra039330
AT2G45550 (E=4e-089) CYP76C4 | CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (204 aa)
         
  0.545
Bra039329
AT2G45570 (E=2e-197) CYP76C2 | CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (469 aa)
         
  0.545
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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