STRINGSTRING
Bra003707 protein (Brassica rapa) - STRING interaction network
"Bra003707" - AT1G76790 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003707AT1G76790 (E=7e-151) | O-methyltransferase family 2 protein (358 aa)    
Predicted Functional Partners:
Bra011759
AT4G37410 (E=7e-212) CYP81F4 | CYP81F4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (501 aa)
     
 
  0.726
Bra010598
AT4G37410 (E=6e-215) CYP81F4 | CYP81F4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (501 aa)
     
 
  0.726
Bra011758
AT4G37400 (E=2e-262) CYP81F3 | CYP81F3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (499 aa)
         
  0.578
Bra010597
AT4G37400 (E=5e-262) CYP81F3 | CYP81F3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (496 aa)
         
  0.578
Bra011762
AT4G37430 (E=5e-252) CYP91A2, CYP81F1 | CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (505 aa)
         
  0.575
Bra040819
AT3G26330 (E=3e-221) CYP71B37 | CYP71B37; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (497 aa)
     
 
  0.554
Bra017871
AT4G39950 (E=6e-272) CYP79B2 | CYP79B2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (541 aa)
     
 
  0.553
Bra037119
AT5G67310 (E=1e-182) CYP81G1 | CYP81G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (776 aa)
         
  0.549
Bra021482
AT3G01090 (E=4e-196) AKIN10, KIN10 | AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase (638 aa)
         
  0.549
Bra030246
AT2G22330 (E=2e-288) CYP79B3 | CYP79B3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (543 aa)
     
 
  0.548
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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