STRINGSTRING
Bra003722 protein (Brassica rapa) - STRING interaction network
"Bra003722" - AT1G76400 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003722AT1G76400 (E=8e-020) | ribophorin I family protein (207 aa)    
Predicted Functional Partners:
Bra037156
AT5G66680 (E=1e-215) DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (435 aa)
     
  0.995
Bra031818
AT5G66680 (E=7e-023) DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (203 aa)
     
  0.995
Bra012091
AT5G66680 (E=7e-215) DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (437 aa)
     
  0.995
Bra038784
AT4G21150 (E=1e-139) HAP6 | HAP6 (HAPLESS 6); dolichyl-diphosphooligosaccharide-protein glycotransferase (760 aa)
     
  0.993
Bra013507
AT4G21150 (E=0.0) HAP6 | HAP6 (HAPLESS 6); dolichyl-diphosphooligosaccharide-protein glycotransferase (696 aa)
     
  0.993
Bra034441
AT1G34130 (E=2e-090) STT3B | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase (513 aa)
     
  0.991
Bra028034
AT1G34130 (E=0.0) STT3B | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase (725 aa)
     
  0.991
Bra028033
AT1G34130 (E=2e-013) STT3B | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase (66 aa)
     
  0.991
Bra020057
AT5G19690 (E=8e-034) STT3A | STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase (96 aa)
     
  0.991
Bra006514
AT5G19690 (E=0.0) STT3A | STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase (778 aa)
     
  0.991
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (9%) [HD]