STRINGSTRING
Bra003762 protein (Brassica rapa) - STRING interaction network
"Bra003762" - AT1G75210 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003762AT1G75210 (E=6e-286) | 5’ nucleotidase family protein (540 aa)    
Predicted Functional Partners:
Bra000085
AT2G38680 (E=3e-128) | 5’-nucleotidase/ magnesium ion binding (311 aa)
         
  0.725
Bra005126
AT2G38280 (E=0.0) FAC1, ATAMPD | FAC1 (EMBRYONIC FACTOR1); AMP deaminase (841 aa)
     
 
    0.561
Bra017131
AT2G38280 (E=0.0) FAC1, ATAMPD | FAC1 (EMBRYONIC FACTOR1); AMP deaminase (799 aa)
     
 
    0.557
Bra040852
AT1G36280 (E=3e-030) | adenylosuccinate lyase, putative / adenylosuccinase, putative (195 aa)
       
    0.555
Bra025641
AT1G02520 (E=1e-034) PGP11 | PGP11 (P-GLYCOPROTEIN 11); ATPase, coupled to transmembrane movement of substances (208 aa)
       
    0.555
Bra013309
AT4G18440 (E=1e-258) | adenylosuccinate lyase, putative / adenylosuccinase, putative (533 aa)
       
    0.555
Bra012596
AT4G18440 (E=4e-255) | adenylosuccinate lyase, putative / adenylosuccinase, putative (531 aa)
       
    0.555
Bra029523
AT4G04880 (E=4e-174) | adenosine/AMP deaminase family protein (355 aa)
     
 
    0.541
Bra016120
AT1G71750 (E=5e-089) | phosphoribosyltransferase family protein (187 aa)
       
    0.535
Bra016088
AT1G72040 (E=3e-239) | deoxynucleoside kinase family (561 aa)
         
  0.535
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (16%) [HD]