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Bra003764 protein (Brassica rapa) - STRING interaction network
"Bra003764" - AT1G75200 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003764AT1G75200 (E=5e-301) | flavodoxin family protein / radical SAM domain-containing protein (649 aa)    
Predicted Functional Partners:
Bra000803
AT4G04670 (E=0.0) | Met-10+ like family protein / kelch repeat-containing protein (987 aa)
     
   
  0.714
Bra020985
AT4G18900 (E=3e-175) | transducin family protein / WD-40 repeat family protein (477 aa)
     
      0.675
Bra020984
AT4G18905 (E=4e-201) | transducin family protein / WD-40 repeat family protein (468 aa)
     
      0.675
Bra013360
AT4G18905 (E=9e-222) | transducin family protein / WD-40 repeat family protein (502 aa)
     
      0.675
Bra012568
AT4G18905 (E=7e-021) | transducin family protein / WD-40 repeat family protein (54 aa)
     
      0.675
Bra011610
AT4G18900 (E=9e-030) | transducin family protein / WD-40 repeat family protein (163 aa)
     
      0.675
Bra020808
AT3G14930 (E=4e-028) HEME1 | HEME1; uroporphyrinogen decarboxylase (254 aa)
       
    0.605
Bra016989
AT2G40490 (E=5e-203) HEME2 | HEME2; uroporphyrinogen decarboxylase (390 aa)
       
    0.605
Bra004574
AT2G40490 (E=5e-132) HEME2 | HEME2; uroporphyrinogen decarboxylase (263 aa)
       
    0.605
Bra001574
AT3G14930 (E=9e-049) HEME1 | HEME1; uroporphyrinogen decarboxylase (108 aa)
       
    0.605
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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