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Bra003775 protein (Brassica rapa) - STRING interaction network
"Bra003775" - AT1G75020 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003775AT1G75020 (E=3e-171) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (380 aa)    
Predicted Functional Partners:
Bra029669
AT2G41540 (E=3e-204) GPDHC1 | GPDHC1; NAD or NADH binding / glycerol-3-phosphate dehydrogenase (NAD+) (445 aa)
       
  0.947
Bra028466
AT5G40610 (E=6e-190) | glycerol-3-phosphate dehydrogenase (NAD+) / GPDH (356 aa)
       
  0.947
Bra016977
AT2G40690 (E=1e-207) GLY1, SFD1 | GLY1; glycerol-3-phosphate dehydrogenase (NAD+) (415 aa)
       
  0.947
Bra004628
AT2G41540 (E=3e-255) GPDHC1 | GPDHC1; NAD or NADH binding / glycerol-3-phosphate dehydrogenase (NAD+) (464 aa)
       
  0.947
Bra027001
AT1G63050 (E=6e-242) | membrane bound O-acyl transferase (MBOAT) family protein (467 aa)
     
  0.943
Bra019778
AT1G12640 (E=3e-244) | membrane bound O-acyl transferase (MBOAT) family protein (466 aa)
     
  0.943
Bra024062
AT4G30580 (E=6e-152) ATS2, EMB1995 | ATS2; 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase (384 aa)
         
  0.942
Bra027046
AT1G62430 (E=9e-228) ATCDS1 | ATCDS1; phosphatidate cytidylyltransferase (421 aa)
   
 
  0.941
Bra013612
AT4G22340 (E=1e-171) | phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative (393 aa)
   
 
  0.941
Bra039323
AT2G45670 (E=3e-255) | calcineurin B subunit-related (531 aa)
         
  0.940
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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