STRINGSTRING
Bra003819 protein (Brassica rapa) - STRING interaction network
"Bra003819" - AT1G74100 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003819AT1G74100 (E=2e-049) SOT16, ATSOT16, CORI-7, ATST5A | SOT16 (SULFOTRANSFERASE 16); desulfoglucosinolate sulfotransferase/ sulfotransferase (129 aa)    
Predicted Functional Partners:
Bra040690
AT3G53150 (E=2e-232) UGT73D1 | UGT73D1 (UDP-glucosyl transferase 73D1); UDP-glycosyltransferase/ transferase, transferring hexosyl groups (507 aa)
         
  0.537
Bra040355
AT3G07020 (E=1e-287) | UDP-glucose-sterol glucosyltransferase (UGT80A2) (638 aa)
         
  0.537
Bra039557
AT4G15280 (E=2e-199) UGT71B5 | UGT71B5 (UDP-GLUCOSYL TRANSFERASE 71B5); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups (481 aa)
         
  0.537
Bra039547
AT4G15480 (E=1e-226) UGT84A1 | UGT84A1; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups (476 aa)
         
  0.537
Bra039545
AT4G15490 (E=2e-240) UGT84A3 | UGT84A3; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups (483 aa)
         
  0.537
Bra039544
AT4G15490 (E=3e-108) UGT84A3 | UGT84A3; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups (239 aa)
         
  0.537
Bra039192
AT2G23260 (E=3e-205) UGT84B1 | UGT84B1 (UDP-glucosyl transferase 84B1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ indole-3-acetate beta-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups (461 aa)
         
  0.537
Bra039191
AT2G23250 (E=6e-195) UGT84B2 | UGT84B2 (UDP-glucosyl transferase 84B2); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups (451 aa)
         
  0.537
Bra039154
AT3G02100 (E=5e-059) | UDP-glucoronosyl/UDP-glucosyl transferase family protein (186 aa)
         
  0.537
Bra039152
AT3G02100 (E=4e-201) | UDP-glucoronosyl/UDP-glucosyl transferase family protein (438 aa)
         
  0.537
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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