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Bra003838 protein (Brassica rapa) - STRING interaction network
"Bra003838" - AT1G73600 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003838AT1G73600 (E=4e-053) | methyltransferase/ phosphoethanolamine N-methyltransferase (112 aa)    
Predicted Functional Partners:
Bra030681
AT1G07420 (E=2e-155) ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase (517 aa)
     
  0.973
Bra039978
AT2G29390 (E=6e-139) ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase (321 aa)
       
  0.892
Bra033117
AT4G12110 (E=1e-169) SMO1-1, ATSMO1, ATSMO1-1 | SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic (298 aa)
       
  0.892
Bra019269
AT4G22756 (E=4e-019) SMO1-2, ATSMO1, ATSMO1-2, SMO1 | SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic (113 aa)
       
  0.892
Bra013643
AT4G22756 (E=4e-157) SMO1-2, ATSMO1, ATSMO1-2, SMO1 | SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic (444 aa)
       
  0.892
Bra039929
AT1G78500 (E=0.0) | pentacyclic triterpene synthase, putative (727 aa)
       
  0.883
Bra035810
AT4G15370 (E=1e-055) BARS1, PEN2 | BARS1 (BARUOL SYNTHASE 1); baruol synthase/ catalytic (140 aa)
       
  0.883
Bra035809
AT1G78500 (E=5e-272) | pentacyclic triterpene synthase, putative (585 aa)
       
  0.883
Bra035079
AT1G78960 (E=0.0) ATLUP2 | ATLUP2; beta-amyrin synthase/ lupeol synthase (765 aa)
       
  0.883
Bra035078
AT1G78940 (E=2e-266) | protein kinase family protein (1230 aa)
       
  0.883
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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